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Article

Achilli, Alessandro, Olivieri, Anna, Pellecchia, Marco, Uboldi, Cristina, Colli, Licia, Al-Zahery, Nadia, Accetturo, Matteo, Pala, Maria, Hooshiar Kashani, Baharak, Perego, Ugo A., Battaglia, Vincenza, Fornarino, Simona, Kalamati, Javad, Houshmand, Massoud, Negrini, Riccardo, Semino, Ornella, Richards, Martin B., Macaulay, Vincent, Ferretti, Luca, Bandelt, Hans-Jürgen, Ajmone-Marsan, Paolo and Torroni, Antonio (2008) Mitochondrial genomes of extinct aurochs survive in domestic cattle. Current Biology, 18 (4). R157-R158. ISSN 09609822

Bandelt, Hans-Jurgen, Herrnstadt, C., Yao, Y. G., Kong, Q. P., Kivisild, Toomas, Rengo, C., Scozzari, Rosaria, Richards, Martin, Villems, R., Macaulay, Vincent, Howell, N., Torroni, A. and Zhang, Y. P. (2003) Identification of Native American Founder mtDNAs Through the Analysis of Complete mtDNA Sequences: Some Caveats. Annals of Human Genetics, 67 (6). pp. 512-524. ISSN 00034800

Barker, Graeme (2002) Prehistoric foragers and farmers in South-East Asia: renewed investigations at Niah Cave, Sarawak. Proceedings of the Prehistoric Society. pp. 147-164.

Brotherton, Paul, Haak, Wolfgang, Templeton, Jennifer, Brandt, Guido, Soubrier, Julien, Adler, Christina Jane, Richards, Stephen M., Der Sarkissian, Clio, Ganslmeier, Robert, Friederich, Susanne, Dresely, Veit, van Oven, Mannis, Kenyon, Rosalie, Van der Hoek, Mark B., Korlach, Jonas, Luong, Khai, Ho, Simon Y.W., Quintana-Murci, Lluis, Behar, Doron M., Meller, Harald, Alt, Kurt W. and Cooper, Alan (2013) Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. Nature Communications, 4 (1764). ISSN 2041-1723

Bryk, Jarek, Somel, Mehmet, Lorenc, Anna and Teschke, Meike (2013) Early gene expression divergence between allopatric populations of the house mouse (Mus musculus domesticus). Ecology and Evolution, 3 (3). pp. 558-568. ISSN 20457758

Bryk, Jarek and Tautz, Diethard (2014) Copy number variants and selective sweeps in natural populations of the house mouse (Mus musculus domesticus). Frontiers in Genetics, 5. ISSN 1664-8021

Chan, Yingguang Frank, Jones, Felicity C., McConnell, Ellen, Bryk, Jarek, Bünger, Lutz and Tautz, Diethard (2012) Parallel Selection Mapping Using Artificially Selected Mice Reveals Body Weight Control Loci. Current Biology, 22 (9). pp. 794-800. ISSN 09609822

Chaubey, G., Metspalu, M., Choi, Y., Magi, R., Romero, I. G., Soares, P., van Oven, M., Behar, D. M., Rootsi, S., Hudjashov, G., Mallick, C. B., Karmin, M., Nelis, M., Parik, J., Reddy, A. G., Metspalu, E., van Driem, G., Xue, Y., Tyler-Smith, C., Thangaraj, K., Singh, L., Remm, M., Richards, Martin B., Lahr, M. M., Kayser, M., Villems, R. and Kivisild, T. (2011) Population Genetic Structure in Indian Austroasiatic Speakers: The Role of Landscape Barriers and Sex-Specific Admixture. Molecular Biology and Evolution, 28 (2). pp. 1013-1024. ISSN 0737-4038

Costa, Marta D, Pereira, Joana B, Pala, Maria, Fernandes, Veronica, Olivien, Anna, Achilli, Alessandro, Perego, Ugo A., Rychkov, Sergei, Naumova, Oksana, Hatina, Jiri, Woodward, Scott R., Eng, Ken Khong, Macaulay, Vincent, Carr, Martin, Soares, Pedro, Pereira, Luísa and Richards, Martin B. (2013) A substantial prehistoric European ancestry amongst Ashkenazi maternal lineages. Nature Communications, 4 (2543). ISSN 2041-1723

Edwards, Ceiridwen J., Magee, David A., Park, Stephen D. E., McGettigan, Paul A., Lohan, Amanda J., Murphy, Alison, Finlay, Emma K., Shapiro, Beth, Chamberlain, Andrew T., Richards, Martin B., Bradley, Daniel G., Loftus, Brendan J. and MacHugh, David E. (2010) A Complete Mitochondrial Genome Sequence from a Mesolithic Wild Aurochs (Bos primigenius). PLoS ONE, 5 (2). e9255. ISSN 1932-6203

Ermini, Luca, Olivieri, Cristina, Rizzi, Ermanno, Corti, Giorgio, Bonnal, Raoul, Soares, Pedro, Luciani, Stefania, Marota, Isolina, De Bellis, Gianluca and Richards, Martin B. (2008) Complete Mitochondrial Genome Sequence of the Tyrolean Iceman. Current Biology, 18 (21). pp. 1687-1693. ISSN 09609822

Gandini, Francesca, Achilli, Alessandro, Pala, Maria, Bodner, Martin, Brandini, Sefania, Huber, Gabriela, Egyed, Balazs, Ferretti, Luca, Gómez-Carballa, Alberto, Salas, Antonio, Scozzari, Rosaria, Cruciani, Fulvio, Coppa, Alfredo, Parson, Walther, Semino, Ornella, Soares, Pedro, Torroni, Antonio, Richards, Martin B. and Olivieri, Anna (2016) Mapping human dispersals into the Horn of Africa from Arabian Ice Age refugia using mitogenomes. Scientific Reports, 6 (25472). ISSN 2045-2322

Geudes, Raul Narciso C. and Smith, Robert H. (2008) Competition strategies and correlated selection on responses to polyandry in the seed beetle Callosobruchus maculatus. Physiological Entomology, 33 (4). pp. 372-381. ISSN 03076962

Gomes, Verónica, Pala, Maria, Salas, Antonio, Álvarez-Iglesias, Vanesa, Amorim, António, Gómez-Carballa, Alberto, Carracedo, Ángel, Clarke, Douglas, Hill, Catherine, Mormina, Maru, Shaw, Marie-Anne, Dunne, David W., Pereira, Rui, Pereira, Vânia, Prata, Maria João, Sánchez-Diz, Paula, Rito, Teresa, Soares, Pedro, Gusmão, Leonor and Richards, Martin B. (2015) Mosaic maternal ancestry in the Great Lakes region of East Africa. Human Genetics, 134 (9). pp. 1013-1027. ISSN 0340-6717

Heissig, Florian, Krause, Johannes, Bryk, Jarek, Khaitovich, Philipp, Enard, Wolfgang and Pääbo, Svante (2005) Functional analysis of human and chimpanzee promoters. Genome Biology, 6 (7). R57. ISSN 14656906

Hippisley-Cox, Charles (2012) Spiders as Potential Bio-Predators for Controlling Woodworm Infestation. Building Engineer, 87 (04). pp. 28-30. ISSN 0969-8213

Jones, E. P., Jóhannesdóttir, F., Gündüz, İ., Richards, Martin B. and Searle, J. B. (2010) The expansion of the house mouse into north-western Europe. Journal of Zoology, 283 (4). pp. 257-268. ISSN 09528369

Kashani, Baharak Hooshiar, Perego, Ugo A., Olivieri, Anna, Angerhofer, Norman, Gandini, Francesca, Carossa, Valeria, Lancioni, Hovirag, Semino, Ornella, Woodward, Scott R., Achilli, Alessandro and Torroni, Antonio (2011) Mitochondrial haplogroup C4c: A rare lineage entering America through the ice-free corridor? American Journal of Physical Anthropology, 147 (1). pp. 35-39. ISSN 0002-9483

Kivisild, Toomas, Grugni, Viola, Battaglia, Vincenza, Hooshiar Kashani, Baharak, Parolo, Silvia, Al-Zahery, Nadia, Achilli, Alessandro, Olivieri, Anna, Gandini, Francesca, Houshmand, Massoud, Sanati, Mohammad Hossein, Torroni, Antonio and Semino, Ornella (2012) Ancient Migratory Events in the Middle East: New Clues from the Y-Chromosome Variation of Modern Iranians. PLoS ONE, 7 (7). e41252. ISSN 1932-6203

Kivisild, Toomas, Kushniarevich, Alena, Sivitskaya, Larysa, Danilenko, Nina, Novogrodskii, Tadeush, Tsybovsky, Iosif, Kiseleva, Anna, Kotova, Svetlana, Chaubey, Gyaneshwer, Metspalu, Ene, Sahakyan, Hovhannes, Bahmanimehr, Ardeshir, Reidla, Maere, Rootsi, Siiri, Parik, Jüri, Reisberg, Tuuli, Achilli, Alessandro, Hooshiar Kashani, Baharak, Gandini, Francesca, Olivieri, Anna, Behar, Doron M., Torroni, Antonio, Davydenko, Oleg and Villems, Richard (2013) Uniparental Genetic Heritage of Belarusians: Encounter of Rare Middle Eastern Matrilineages with a Central European Mitochondrial DNA Pool. PLoS ONE, 8 (6). e66499. ISSN 1932-6203

Lambert, M. S., Quy, R. J., Smith, Robert H. and Cowan, D. P. (2008) The effect of habitat management on home-range size and survival of rural Norway rat populations. Journal of Applied Ecology, 45 (6). pp. 1753-1761. ISSN 0021-8901

Lehane, Michael J., Reeves, R. Guy, Denton, Jai A., Santucci, Fiammetta, Bryk, Jarek and Reed, Floyd A. (2012) Scientific Standards and the Regulation of Genetically Modified Insects. PLoS Neglected Tropical Diseases, 6 (1). e1502. ISSN 1935-2735

Lorenc, Anna, Bryk, Jarek and Bartnik, Ewa (2004) Mitochondrial DNA in Tumors. Toxicology Mechanisms and Methods, 14 (1-2). pp. 85-90. ISSN 1537-6516

Lorenc, Anna, Bryk, Jarek, Golik, Paweł, Kupryjańczyk, Jolanta, Ostrowski, Jerzy, Pronicki, Maciej, Semczuk, Andrzej, Szołkowska, Małgorzata and Bartnik, Ewa (2003) Homoplasmic MELAS A3243G mtDNA mutation in a colon cancer sample. Mitochondrion, 3 (2). pp. 119-124. ISSN 15677249

Morris, Richard K. (1997) Why peat extraction must be stopped. British Archaeology (28). ISSN 1357-4442

Park, Stephen D. E., Magee, David A., McGettigan, Paul A., Teasdale, Matthew D., Edwards, Ceiridwen J., Lohan, Amanda J., Murphy, Alison, Braud, Martin, Donoghue, Mark T., Liu, Yuan, Chamberlain, Andrew T., Rue-Albrecht, Kévin, Schroeder, Steven, Spillane, Charles, Tai, Shuaishuai, Bradley, Daniel G., Sonstegard, Tad S., Loftus, Brendan J. and MacHugh, David E. (2015) Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle. Genome Biology, 16 (1). p. 234. ISSN 14656906

Paschou, Peristera, de Saint Pierre, Michelle, Gandini, Francesca, Perego, Ugo A., Bodner, Martin, Gómez-Carballa, Alberto, Corach, Daniel, Angerhofer, Norman, Woodward, Scott R., Semino, Ornella, Salas, Antonio, Parson, Walther, Moraga, Mauricio, Achilli, Alessandro, Torroni, Antonio and Olivieri, Anna (2012) Arrival of Paleo-Indians to the Southern Cone of South America: New Clues from Mitogenomes. PLoS ONE, 7 (12). e51311. ISSN 1932-6203

Pereira, Luísa, Silva, Nuno M, Franco-Duarte, Ricardo, Fernandes, Verónica, Pereira, Joana B, Costa, Marta D, Martins, Haidé, Soares, Pedro, Behar, Doron M, Richards, Martin B. and Macaulay, Vincent (2010) Population expansion in the North African Late Pleistocene signalled by mitochondrial DNA haplogroup U6. BMC Evolutionary Biology, 10 (1). p. 390. ISSN 1471-2148

Pettitt, P. B., Davies, W., Gamble, C. S. and Richards, Martin (2003) Palaeolithic radiocarbon chronology: quantifying our confidence beyond two half-lives. Journal of Archaeological Science, 30 (12). pp. 1685-1693. ISSN 03054403

Pulvers, J. N., Bryk, Jarek, Fish, J. L., Wilsch-Brauninger, M., Arai, Y., Schreier, D., Naumann, R., Helppi, J., Habermann, B., Vogt, J., Nitsch, R., Toth, A., Enard, W., Paabo, S. and Huttner, W. B. (2010) Mutations in mouse Aspm (abnormal spindle-like microcephaly associated) cause not only microcephaly but also major defects in the germline. Proceedings of the National Academy of Sciences, 107 (38). pp. 16595-16600. ISSN 00278424

Reeves, R. Guy, Bryk, Jarek, Altrock, Philipp M., Denton, Jai A. and Reed, Floyd A. (2014) First Steps towards Underdominant Genetic Transformation of Insect Populations. PLoS ONE, 9 (5). e97557. ISSN 1932-6203

Richards, Martin B. (2003) The Neolithic invasion of Europe. Annual Review of Anthropology, 32 (1). pp. 135-162. ISSN 00846570

Salas, Antonio, Lovo-Gómez, José, Álvarez-Iglesias, Vanesa, Cerezo, María, Lareu, María Victoria, Macaulay, Vincent, Richards, Martin B. and Carracedo, Ángel (2009) Mitochondrial Echoes of First Settlement and Genetic Continuity in El Salvador. PLoS ONE, 4 (9). e6882. ISSN 1932-6203

Semczuk, Andrzej, Lorenc, Anna, Putowski, Lechoslaw, Bryk, Jarek, Marzec, B. and Bartnik, Ewa (2006) Mitochondrial Mutations in Primary Human Endometrial Carcinomas: Poster Session 3. International Journal of Gynecological Cancer, 16 (s3). pp. 764-814. ISSN 1048-891X

Semczuk, Andrzej, Lorenc, Anna, Putowski, Lechoslaw, Futyma, Konrad, Bryk, Jarek, Miotla, Pawel and Bartnik, Ewa (2006) Clinicoprognostical features of endometrial cancer patients with somatic mtDNA mutations. Oncology Reports, 16 (5). pp. 1041-1045. ISSN 1021-335X

Soares, P., Alshamali, F., Pereira, J. B., Fernandes, V., Silva, N. M., Afonso, C., Costa, M. D., Musilova, E., Macaulay, V., Richards, Martin B., Cerny, V. and Pereira, L. (2012) The Expansion of mtDNA Haplogroup L3 within and out of Africa. Molecular Biology and Evolution, 29 (3). pp. 915-927. ISSN 0737-4038

Soares, P., Trejaut, J. A., Loo, J.-H., Hill, C., Mormina, M., Lee, C.-L., Chen, Y.-M., Hudjashov, G., Forster, P., Macaulay, V., Bulbeck, D., Oppenheimer, S., Lin, M. and Richards, Martin B. (2008) Climate Change and Postglacial Human Dispersals in Southeast Asia. Molecular Biology and Evolution, 25 (6). pp. 1209-1218. ISSN 0737-4038

Soares, Pedro, Achilli, Alessandro, Semino, Ornella, Davies, William, Macaulay, Vincent, Bandelt, Hans-Jürgen, Torroni, Antonio and Richards, Martin B. (2010) The Archaeogenetics of Europe. Current Biology, 20 (4). R174-R183. ISSN 09609822

Stajich, Jason E., Bryk, Jarek, Hardouin, Emilie, Pugach, Irina, Hughes, David, Strotmann, Rainer, Stoneking, Mark and Myles, Sean (2008) Positive Selection in East Asians for an EDAR Allele that Enhances NF-κB Activation. PLoS ONE, 3 (5). e2209. ISSN 1932-6203

Toppo, Stefano, Vanin, Stefano, Bosello, Valentina and Tosatto, Silvio C. E. (2008) Evolutionary and Structural Insights Into the Multifaceted Glutathione Peroxidase (Gpx) Superfamily. Antioxidant Redox Signaling, 10 (9). pp. 1501-1514. ISSN 1523-0864

Wolf, Jochen BW and Bryk, Jarek (2011) General lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seq. BMC Genomics, 12 (1). p. 91. ISSN 1471-2164

Yeloff, D.E., Labadz, J.C. and Hunt, Chris O. (2006) Causes of degradation and erosion of a blanket mire in the southern Pennines, UK. Mires and Peat, 1. ISSN 1819-754X

Book Chapter

Baldauf, Sandra L., Romeralo, Maria and Carr, Martin (2013) The Evolutionary Origin of Animals and Fungi. In: Evolution from the Galapagos: Two Centuries after Darwin. Social and Ecological Interactions in the Galapagos Islands, 2 . Springer, pp. 73-106. ISBN 9781461467328

Pala, Maria, Soares, Pedro, Chaubey, Gyaneshwer and Richards, Martin B. (2015) Archaeogenetics. In: The Cambridge World History Volume 2. A World with Agriculture, 12,000 BCE–500 CE . Cambridge University Press, Cambridge, UK, pp. 26-54. ISBN 9780521192187

Soares, Pedro, Rito, Teresa, Pereira, Luísa and Richards, Martin B. (2016) A Genetic Perspective on African Prehistory. In: Africa from MIS 6-2. Vertebrate Paleobiology and Paleoanthropology, IV . Springer, London, UK, pp. 383-405. ISBN 978-94-017-7519-9

Vanin, Stefano and Turchetto, Margherita (2008) La faune entomologique des sites enneigés en permanences dans le Massif des Dolomites (Italie). In: Insectes d’altitude, insectes en altitude. Actes des premières rencontres entomologiques du Massif central. Actes des premières rencontres entomologiques du Massif central, Saint-Gervais-sous-Meymont, France, p. 59.

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